Enzyme simulator: results

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Iterations: 8 +  Columns: 8 +  Style: SNFG | UOXF  
GlcNAc limit: 4 +  Cell height:  4 + Toggle: labels

Structures
39 Human milk oligosaccharides generated
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Glycan profile
Lex: 0 (0%)    SLex: 0 (0%)    Lea: 11 (28%)    SLea: 11 (28%)    Leb: 0 (0%)    Ley: 0 (0%)    A: 0 (0%)    B: 0 (0%)    H: 0 (0%)    Sda/Cad: 0 (0%)   
Enzyme profile
6 enzymes are knocked out Change
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Reaction network
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G[L4G][S3L4G][L4G]->[S3L4G][Y3L4G][L4G]->[Y3L4G][L4[f3]G][L4G]->[L4[f3]G][L3Y3L4G][Y3L4G]->[L3Y3L4G][[Y6][Y3]L4G][Y3L4G]->[[Y6][Y3]L4G][S3L4[f3]G][L4[f3]G]->[S3L4[f3]G][Y3L4[f3]G][L4[f3]G]->[Y3L4[f3]G][L3Y3L4[f3]G][Y3L4[f3]G]->[L3Y3L4[f3]G][S3L3Y3L4G][L3Y3L4G]->[S3L3Y3L4G][L3[f4]Y3L4G][L3Y3L4G]->[L3[f4]Y3L4G][[Y6][L3Y3]L4G][[Y6][Y3]L4G]->[[Y6][L3Y3]L4G][[L3Y6][Y3]L4G][[Y6][Y3]L4G]->[[L3Y6][Y3]L4G][S3L3[f4]Y3L4G][L3[f4]Y3L4G]->[S3L3[f4]Y3L4G][S3L3Y3L4[f3]G][L3Y3L4[f3]G]->[S3L3Y3L4[f3]G][L3[f4]Y3L4[f3]G][L3Y3L4[f3]G]->[L3[f4]Y3L4[f3]G][[L3Y6][L3Y3]L4G][[Y6][L3Y3]L4G]->[[L3Y6][L3Y3]L4G][[Y6][S3L3Y3]L4G][[Y6][L3Y3]L4G]->[[Y6][S3L3Y3]L4G][[Y6][L3[f4]Y3]L4G][[Y6][L3Y3]L4G]->[[Y6][L3[f4]Y3]L4G][[L3Y6][Y3]L4G]->[[L3Y6][L3Y3]L4G][[S3L3Y6][Y3]L4G][[L3Y6][Y3]L4G]->[[S3L3Y6][Y3]L4G][[L3[f4]Y6][Y3]L4G][[L3Y6][Y3]L4G]->[[L3[f4]Y6][Y3]L4G][S3L3[f4]Y3L4[f3]G][L3[f4]Y3L4[f3]G]->[S3L3[f4]Y3L4[f3]G][[L3Y6][S3L3Y3]L4G][[L3Y6][L3Y3]L4G]->[[L3Y6][S3L3Y3]L4G][[S3L3Y6][L3Y3]L4G][[L3Y6][L3Y3]L4G]->[[S3L3Y6][L3Y3]L4G][[L3Y6][L3[f4]Y3]L4G][[L3Y6][L3Y3]L4G]->[[L3Y6][L3[f4]Y3]L4G][[L3[f4]Y6][L3Y3]L4G][[L3Y6][L3Y3]L4G]->[[L3[f4]Y6][L3Y3]L4G][[S3L3Y6][Y3]L4G]->[[S3L3Y6][L3Y3]L4G][[L3[f4]Y6][Y3]L4G]->[[L3[f4]Y6][L3Y3]L4G][[S3L3[f4]Y6][Y3]L4G][[L3[f4]Y6][Y3]L4G]->[[S3L3[f4]Y6][Y3]L4G][[Y6][S3L3Y3]L4G]->[[L3Y6][S3L3Y3]L4G][[Y6][L3[f4]Y3]L4G]->[[L3Y6][L3[f4]Y3]L4G][[Y6][S3L3[f4]Y3]L4G][[Y6][L3[f4]Y3]L4G]->[[Y6][S3L3[f4]Y3]L4G][[S3L3Y6][S3L3Y3]L4G][[L3Y6][S3L3Y3]L4G]->[[S3L3Y6][S3L3Y3]L4G][[L3[f4]Y6][S3L3Y3]L4G][[L3Y6][S3L3Y3]L4G]->[[L3[f4]Y6][S3L3Y3]L4G][[S3L3Y6][L3[f4]Y3]L4G][[S3L3Y6][L3Y3]L4G]->[[S3L3Y6][L3[f4]Y3]L4G][[S3L3Y6][L3Y3]L4G]->[[S3L3Y6][S3L3Y3]L4G][[L3Y6][S3L3[f4]Y3]L4G][[L3Y6][L3[f4]Y3]L4G]->[[L3Y6][S3L3[f4]Y3]L4G][[L3Y6][L3[f4]Y3]L4G]->[[S3L3Y6][L3[f4]Y3]L4G][[L3[f4]Y6][L3[f4]Y3]L4G][[L3Y6][L3[f4]Y3]L4G]->[[L3[f4]Y6][L3[f4]Y3]L4G][[L3[f4]Y6][L3Y3]L4G]->[[L3[f4]Y6][L3[f4]Y3]L4G][[L3[f4]Y6][L3Y3]L4G]->[[L3[f4]Y6][S3L3Y3]L4G][[S3L3[f4]Y6][L3Y3]L4G][[L3[f4]Y6][L3Y3]L4G]->[[S3L3[f4]Y6][L3Y3]L4G][[S3L3[f4]Y6][Y3]L4G]->[[S3L3[f4]Y6][L3Y3]L4G][[Y6][S3L3[f4]Y3]L4G]->[[L3Y6][S3L3[f4]Y3]L4G][[S3L3Y6][S3L3[f4]Y3]L4G][[L3Y6][S3L3[f4]Y3]L4G]->[[S3L3Y6][S3L3[f4]Y3]L4G][[L3[f4]Y6][S3L3[f4]Y3]L4G][[L3Y6][S3L3[f4]Y3]L4G]->[[L3[f4]Y6][S3L3[f4]Y3]L4G][[S3L3Y6][L3[f4]Y3]L4G]->[[S3L3Y6][S3L3[f4]Y3]L4G][[L3[f4]Y6][L3[f4]Y3]L4G]->[[L3[f4]Y6][S3L3[f4]Y3]L4G][[S3L3[f4]Y6][L3[f4]Y3]L4G][[L3[f4]Y6][L3[f4]Y3]L4G]->[[S3L3[f4]Y6][L3[f4]Y3]L4G][[S3L3[f4]Y6][S3L3Y3]L4G][[L3[f4]Y6][S3L3Y3]L4G]->[[S3L3[f4]Y6][S3L3Y3]L4G][[S3L3[f4]Y6][L3Y3]L4G]->[[S3L3[f4]Y6][L3[f4]Y3]L4G][[S3L3[f4]Y6][L3Y3]L4G]->[[S3L3[f4]Y6][S3L3Y3]L4G][[S3L3[f4]Y6][S3L3[f4]Y3]L4G][[L3[f4]Y6][S3L3[f4]Y3]L4G]->[[S3L3[f4]Y6][S3L3[f4]Y3]L4G][[S3L3[f4]Y6][L3[f4]Y3]L4G]->[[S3L3[f4]Y6][S3L3[f4]Y3]L4G]
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Network properties: no. of nodes = 39 ; avg degree = 2.7692

Colour key: N-acetylgalactosaminyltransferases (brown); N-acetylglucosaminyltransferases (blue); fucosyltransferases (red); galactosyltransferases (yellow); sialyltransferases (magenta); sulfotransferases (orange)


Site last updated 2023-03-24