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(Example) Enter
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The anomericity of monosaccharides is implicit, based on the enzymes of N-linked glycosylation: L and Y are β-linked while f, S and V are assumed to be α-linked. This can be overridden by placing a or b after the sugar symbol, thus La3 would draw an α1,3-linked galactose.
The size of networks produced in simulations can be limited by decreasing the maximum number of GlcNAc residues per glycan using the Control panel. The default value is set to 6.
Letter | Symbol | IUPAC Symbol | Definition | Default anomer |
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f | Fuc | L-Fucose | α | |
G | Glc | D-Glucose | β | |
K | Kdn | 2-Keto-3-deoxy-D-glycero-D-galacto-nononic acid | α | |
L | Gal | D-Galactose | β | |
M | Man | D-Mannose | α | |
N | Neu5Gc | N-Glycolylneuraminic acid | α | |
S | Neu5Ac | N-Acetylneuraminic acid (sialic acid) | α | |
u | IdoA | L-Iduronic acid | α | |
V | GalNAc | N-Acetyl-D-galactosamine | α | |
X | Xyl | D-Xylose | β | |
Y | GlcNAc | N-Acetyl-D-glucosamine | β | |
Z | GlcA | D-Glucuronic acid | β | |
s | -HSO3 | Sulfate | - | |
a,b | Anomeric linkage type | - |